Pairwise Alignments

Query, 254 a.a., flagellar motor protein PomA from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., Flagellar motor rotation protein MotA from Xanthomonas campestris pv. campestris strain 8004

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 57/262 (21%), Positives = 110/262 (41%), Gaps = 30/262 (11%)

Query: 16  VIMAMVLGGSIMMFVDVVSV-----LIVVGGSVFVVLMKFEMGQFFGAAK--IAG--KAF 66
           V++  VLGG ++    + ++     L+++GG+     +    G+        + G  K  
Sbjct: 9   VVIVSVLGGYVLSHGKLGALWQPYELMIIGGAALGAFLVSTPGKIVKETLTGVMGVFKGP 68

Query: 67  MFKADAPEDLIAKIVEMADAARKGGFLALEE-MEIPNPFMQKGI--DLLVDGHDADVVRA 123
            +K+D  +D ++ I E+ + AR+ GF+ALE+ +E P      G    +L D H  D +  
Sbjct: 69  QYKSDDYKDTLSLIYELLNKARRDGFMALEDHVEKPQDSTIFGTYPKVLADHHLLDFITD 128

Query: 124 TLQKDIVLTDERHS-----------------KGTQVFRAFGDVAPAMGMIGTLVGLVAML 166
            L+  I    E H                            D  P  G++  ++G+V  +
Sbjct: 129 CLRLMIGSNIEPHELEPLLELELEKHHHEALAPAHALSKVSDGLPGFGIVAAVLGIVITM 188

Query: 167 SNMDDP-KSIGPAMAVALLTTLYGAVLSNMIFFPIADKLALRRDQETLNRRLIMDGVLAI 225
            ++  P + IG  +  AL+ T  G +L+     P+   +  R +Q+      +   +LA 
Sbjct: 189 GSIGGPIEEIGHHVGAALVGTFLGILLAYGFVSPLPAAMEARAEQDGRIYEAVKTALLAC 248

Query: 226 QDGQNPRVIDSYLKNYLNASKR 247
             G NP++   + +  L ++ R
Sbjct: 249 LRGYNPKIALEFARKTLPSNVR 270