Pairwise Alignments

Query, 254 a.a., flagellar motor protein PomA from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., flagellar motor protein MotA from Sinorhizobium meliloti 1021

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 57/269 (21%), Positives = 111/269 (41%), Gaps = 30/269 (11%)

Query: 3   LATLVGLIGGMAFVIMAMVLGGSIMMFVDVVSVLIVVGGSVFVVLMKFEMGQFFGAAKIA 62
           L T   ++GG       M +GG + +      ++I+ G  +   +M   M       K  
Sbjct: 8   LVTFGCILGGY------MAMGGHLEVLNQPFELMIIGGAGIGGFIMANSMKVVKDTGKAL 61

Query: 63  GKAFMFKADAPEDLIAKIVEMADAARKGGFLALEEME--IPNP----------------- 103
           G+AF  K     + +  +  +    R     +  E+E  I NP                 
Sbjct: 62  GEAFRHKVPKEREYLDTLGVLYSLMRDLRTKSRNEIESHIDNPEESSIFQSAPTVLQNKE 121

Query: 104 ---FMQKGIDLLVDGHD-ADVVRATLQKDIVLTDERHSKGTQVFRAFGDVAPAMGMIGTL 159
              F+   + L++ G+  +  + A + ++I        K        GD  PA+G++  +
Sbjct: 122 LTAFICDYVRLIIIGNARSHEIEALMDEEIQTITHDKMKCYHAMTTMGDALPAIGIVAAV 181

Query: 160 VGLV-AMLSNMDDPKSIGPAMAVALLTTLYGAVLSNMIFFPIADKLALRRDQETLNRRLI 218
           +G++ AM +  + P+ +G  +A AL+ TL G  LS  I  P+   +   R+++     ++
Sbjct: 182 LGVIKAMGAISEAPEVLGAKIAAALVGTLLGVFLSYSIVGPLVANIKSVREKQNRLYVIV 241

Query: 219 MDGVLAIQDGQNPRVIDSYLKNYLNASKR 247
              +LA  +G  P+V   Y +  ++A +R
Sbjct: 242 KQTLLAYMNGSVPQVALEYGRKTISAYER 270