Pairwise Alignments

Query, 254 a.a., flagellar motor protein PomA from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., flagellar motor component from Dechlorosoma suillum PS

 Score =  138 bits (347), Expect = 1e-37
 Identities = 74/246 (30%), Positives = 143/246 (58%), Gaps = 3/246 (1%)

Query: 1   MDLATLVGLIGGMAFVIMAMVL-GGSIMMFVDVVSVLIVVGGSVFVVLMKFEMGQFFGAA 59
           MD  +++GL+ G+  +I   +L GG +   +   + +IV+GG+   VL++  +     A 
Sbjct: 1   MDSISIIGLLLGLGAIIGGQILEGGHLGSLLQPTAAMIVLGGTFGAVLLQSPVSTVVRAF 60

Query: 60  KIAGKAFMFKADAPEDLIAKIVEMADAARKGGFLALEEM--EIPNPFMQKGIDLLVDGHD 117
           K+    ++  A     +I  I + +  +R+ G LALE    ++ +PF+QKG+ LLVDG +
Sbjct: 61  KMLKWVWVPPAVNHAWMINSISDWSHVSRREGLLALEGFIAQLRDPFIQKGLQLLVDGAE 120

Query: 118 ADVVRATLQKDIVLTDERHSKGTQVFRAFGDVAPAMGMIGTLVGLVAMLSNMDDPKSIGP 177
            + +R  L+ +I   +E    G + + + G  +P +G+IG ++GL+ ++ N+ DP  +G 
Sbjct: 121 PERLREVLEVEIGTYEEELKAGAKFWESAGGFSPTIGIIGAVMGLIHVMENLSDPSKLGA 180

Query: 178 AMAVALLTTLYGAVLSNMIFFPIADKLALRRDQETLNRRLIMDGVLAIQDGQNPRVIDSY 237
            +AVA + T+YG  ++N++  P++ KL     +    R +++DG++ I +G NPR+I+S 
Sbjct: 181 GIAVAFVATIYGVGMANLVLIPMSTKLKAHIARLVTLREMLVDGLVGIANGDNPRIIESR 240

Query: 238 LKNYLN 243
           L+ Y++
Sbjct: 241 LQGYVS 246