Pairwise Alignments

Query, 254 a.a., flagellar motor protein PomA from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., flagellar motor protein PomA from Marinobacter adhaerens HP15

 Score =  253 bits (647), Expect = 2e-72
 Identities = 128/247 (51%), Positives = 176/247 (71%)

Query: 1   MDLATLVGLIGGMAFVIMAMVLGGSIMMFVDVVSVLIVVGGSVFVVLMKFEMGQFFGAAK 60
           MD ATL+GL+G    +  A++LG S ++F++  S+LIVVGG++ VVL KF   QF GA K
Sbjct: 1   MDFATLIGLVGASLLIASAVILGTSPLVFINPASLLIVVGGTMLVVLAKFSFAQFLGAFK 60

Query: 61  IAGKAFMFKADAPEDLIAKIVEMADAARKGGFLALEEMEIPNPFMQKGIDLLVDGHDADV 120
            A +AF FK    +  I ++V++A+ ARK G L LE+ EI +PF+ +GI +LVDG D   
Sbjct: 61  AAARAFKFKLPETQASIEELVDIANVARKEGVLGLEDREISSPFLGQGIQMLVDGQDGKT 120

Query: 121 VRATLQKDIVLTDERHSKGTQVFRAFGDVAPAMGMIGTLVGLVAMLSNMDDPKSIGPAMA 180
           ++  L K+ ++T + +  G +VF A  DVAPAMGMIGTL+GLV MLSNM+DPKSIGPAMA
Sbjct: 121 IKELLNKERLMTLDHNRSGAKVFTAMADVAPAMGMIGTLIGLVQMLSNMEDPKSIGPAMA 180

Query: 181 VALLTTLYGAVLSNMIFFPIADKLALRRDQETLNRRLIMDGVLAIQDGQNPRVIDSYLKN 240
           VALLTTLYGA+++ MI  PIADKL+LR  +E   + L +D ++AIQ+G NPR+I+  L +
Sbjct: 181 VALLTTLYGAMIATMIATPIADKLSLRMTEEARMQSLYIDALVAIQEGTNPRIIEQMLSS 240

Query: 241 YLNASKR 247
           YL   +R
Sbjct: 241 YLPPKER 247