Pairwise Alignments

Query, 254 a.a., flagellar motor protein PomA from Vibrio cholerae E7946 ATCC 55056

Subject, 283 a.a., flagellar motor protein MotA from Marinobacter adhaerens HP15

 Score = 57.0 bits (136), Expect = 4e-13
 Identities = 58/268 (21%), Positives = 111/268 (41%), Gaps = 27/268 (10%)

Query: 6   LVGLIGGMAFVIMAMVL-GGSIMMFVDVVSVLIVVG---GSVFVVLMKFEMGQFFGAAKI 61
           +VG I  +A V+   VL GG++M+      VLI+ G   GS  +      + + FG    
Sbjct: 4   IVGSIIVLASVLTGYVLHGGNLMVLWQPTEVLIIFGAALGSFIIANPVHTLKEVFGKGVQ 63

Query: 62  AGKAFMFKADAPEDLIAKIVEMADAARKGGFLALEEMEIPNP------------------ 103
                 +K     DL++ + E+ D +RK G +A+EE +I NP                  
Sbjct: 64  LLTGSPYKKAFYMDLLSLLYEIFDKSRKQGVMAIEE-DIDNPEASQIFSRYPAVMKSKEL 122

Query: 104 --FMQKGIDLLVDGHDA-DVVRATLQKDIVLTDERHSKGTQVFRAFGDVAPAMGMIGTLV 160
             F+   + ++  G+ A   +   ++ +I        +         D  P +G++  ++
Sbjct: 123 LAFITDYLRIISSGNMATHELEGMMENEIDSRQHELEEPAHAVNKIADALPGLGIVAAVL 182

Query: 161 GLVAMLSNM-DDPKSIGPAMAVALLTTLYGAVLSNMIFFPIADKLALRRDQETLNRRLIM 219
           G+V  ++ + + P+ IG ++A AL+ T  G  +      P +  +      E      + 
Sbjct: 183 GIVITMNFLTEGPEKIGLSVAAALVGTFLGIFMGYGFVGPASIAMEHAAKYELKAYECVK 242

Query: 220 DGVLAIQDGQNPRVIDSYLKNYLNASKR 247
             ++A   GQ P++   + +  L   KR
Sbjct: 243 SAIVATVSGQAPQMAIEFGRKALPTDKR 270