Pairwise Alignments

Query, 254 a.a., flagellar motor protein PomA from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., chemotaxis protein MotA from Marinobacter adhaerens HP15

 Score =  148 bits (374), Expect = 9e-41
 Identities = 77/245 (31%), Positives = 146/245 (59%), Gaps = 3/245 (1%)

Query: 1   MDLATLVGLIGGMAFVIMAMVL-GGSIMMFVDVVSVLIVVGGSVFVVLMKFEMGQFFGAA 59
           MD+ +L+G+I   A ++   +L GG++    +  + +IV+GG++   +++        A 
Sbjct: 3   MDILSLLGVILAFAAILGGNLLEGGAVGSLFNGPAAIIVIGGTLAATILQTSWPMLKRAF 62

Query: 60  KIAGKAFMFKADAPEDLIAKIVEMADAARKGGFLALEEM--EIPNPFMQKGIDLLVDGHD 117
                 F       ED I K+++ +  ARK G L LE +    P PF +KG+ LLVDG +
Sbjct: 63  TQVRWVFFPPFINLEDGIGKVIDWSVKARKQGLLGLEGLAEREPEPFARKGLQLLVDGAE 122

Query: 118 ADVVRATLQKDIVLTDERHSKGTQVFRAFGDVAPAMGMIGTLVGLVAMLSNMDDPKSIGP 177
            + +R  ++ D+   ++R  +  +VF A G  +P +G+IG ++GL+ +++N++DP+S+G 
Sbjct: 123 TETIRGIMEVDLESREQRDLESAKVFEAMGGYSPTIGIIGAVMGLIQVMTNLEDPQSLGS 182

Query: 178 AMAVALLTTLYGAVLSNMIFFPIADKLALRRDQETLNRRLIMDGVLAIQDGQNPRVIDSY 237
            +A A + T+YG  L+N++FFP+A+K+     + T    +++DG++AI +G+NP+ I+  
Sbjct: 183 GIATAFVATIYGVALANLLFFPVANKMRGIVRERTRYEDMMIDGLIAIAEGENPKSIELR 242

Query: 238 LKNYL 242
           L+ +L
Sbjct: 243 LRGFL 247