Pairwise Alignments

Query, 254 a.a., flagellar motor protein PomA from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., chemotaxis protein MotA from Paraburkholderia graminis OAS925

 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 59/265 (22%), Positives = 104/265 (39%), Gaps = 41/265 (15%)

Query: 24  GSIMMFVDVVSVLIVVGGSVFVVLMKFEMGQFFGAA-----------------KIAGKAF 66
           G +++   V+   I VGG +  ++  FE+   FGAA                 K     F
Sbjct: 6   GWLLVIGSVIGSFIGVGGHLPALIQPFELLCIFGAAIGAFVVSNPTSTLKKTLKAIPSCF 65

Query: 67  MFKADAPE---DLIAKIVEMADAARKGGFLALE-EMEIPNP--FMQKGIDLLVDGHDADV 120
                  E   +LIA + E+   ARK G ++LE ++  P      QK   +L D H  D 
Sbjct: 66  KGGGYTKEKYLELIALLYELLQKARKEGMMSLEADVFAPEESVIFQKYPHVLSDHHLLDF 125

Query: 121 -----------------VRATLQKDIVLTDERHSKGTQVFRAFGDVAPAMGMIGTLVGLV 163
                            V+  + +++       S      +   D  PA G++  ++G+V
Sbjct: 126 IVDYLRMMSGGNVNVLEVQDLMDEELATHHAEASVAANAIQKMADGLPAFGIVAAVMGVV 185

Query: 164 AMLSNMDDPKSI-GPAMAVALLTTLYGAVLSNMIFFPIADKLALRRDQETLNRRLIMDGV 222
             + ++  P ++ G  +A AL+ T  G +L+     P+AD L  +   E    + +   +
Sbjct: 186 HTMGSVGAPPAVLGEMIAGALVGTFLGILLAYGFIGPLADLLNAKGRAEAKPFQCVKAVL 245

Query: 223 LAIQDGQNPRVIDSYLKNYLNASKR 247
           LA   G  P +   + +  L  + R
Sbjct: 246 LASLSGYAPPIAVEFGRKVLFTADR 270