Pairwise Alignments

Query, 254 a.a., flagellar motor protein PomA from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., flagellar motor protein MotA from Burkholderia phytofirmans PsJN

 Score =  135 bits (341), Expect = 6e-37
 Identities = 73/241 (30%), Positives = 131/241 (54%), Gaps = 3/241 (1%)

Query: 1   MDLATLVGLIGGMAFVIMAMVL-GGSIMMFVDVVSVLIVVGGSVFVVLMKFEMGQFFGAA 59
           MDL TL G + G+  ++    L GG       + + +IV+GG+   V+++    +FF   
Sbjct: 1   MDLLTLFGAVFGVTAIVAGFSLEGGHFTSLFQLEAFVIVLGGTFGAVMIQNTWARFFDGI 60

Query: 60  KIAGKAFMFKADAPEDLIAKIVEMADAARKGGFLALEEMEIP--NPFMQKGIDLLVDGHD 117
           K    AF+       + ++ ++E  D A+  G L  E +E    NPF ++G++LL +G  
Sbjct: 61  KQLRLAFVKARQVDRESLSVLLEWGDQAKLNGMLVFESIEAGGINPFAKRGLELLANGVS 120

Query: 118 ADVVRATLQKDIVLTDERHSKGTQVFRAFGDVAPAMGMIGTLVGLVAMLSNMDDPKSIGP 177
             V+   LQ+++   +  H    ++++  G  AP  G++G ++GL+ +  +M +P  +G 
Sbjct: 121 TAVLEDALQRELDAYERNHMLAARIWQQAGGYAPTFGILGAVLGLIQVTGHMLEPAQLGQ 180

Query: 178 AMAVALLTTLYGAVLSNMIFFPIADKLALRRDQETLNRRLIMDGVLAIQDGQNPRVIDSY 237
            +AVA + TLYG  L+N++F P+  K+  + D E   RRL +DG+LAI   ++P  I++ 
Sbjct: 181 GIAVAFVATLYGLALANLVFLPLYGKIRAQVDSELRFRRLYLDGLLAISRKESPHTIETR 240

Query: 238 L 238
           L
Sbjct: 241 L 241