Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) from Pseudomonas fluorescens FW300-N2E2

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 72/234 (30%), Positives = 120/234 (51%), Gaps = 22/234 (9%)

Query: 41  GGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCH 100
           GGKR RP LV + G+ LG E  D+   A+ +E +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDMRLLAATIEFLHTATLLHDDV--VDMSGMRRGRSTAN 100

Query: 101 IQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDL 160
             +  A ++L GD L + +F ++         E   + +++ L++A+  + +  G+ L L
Sbjct: 101 AMWGNAPSVLVGDFLYSRSFEMMV--------ELGSMPVMKILSQAT--RIIAEGEVLQL 150

Query: 161 AAENRLISLEE--LETIHRNKTGALMRCAIRLGALAAG---EKGRAMLPHLDRYAEAVGL 215
           +      + EE  +E I R KT  L   +    A  AG   E+  A    L  + + +G+
Sbjct: 151 SKVRDASTTEETYMEVI-RGKTAMLFEASTHSAAALAGASVEQSEA----LRTFGDHLGV 205

Query: 216 AFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQKAHTLLQEAL 269
           AFQ+ DD+LD   D ETLGK  G D    K T P +  +     +   L+++A+
Sbjct: 206 AFQLVDDLLDYKGDAETLGKNVGDDLAEGKPTLPLIYTMREGTPEQAALVRQAI 259