Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) from Pseudomonas fluorescens FW300-N2E2

 Score =  267 bits (682), Expect = 2e-76
 Identities = 149/289 (51%), Positives = 187/289 (64%)

Query: 6   SSYQQRNNQQLDQWLNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLD 65
           +S Q R N  LD   +    +   L EAMRY ++ GGKR RP L Y   + LG +    +
Sbjct: 7   ASSQARVNAALDSLFSAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGQAEQAN 66

Query: 66  TPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAE 125
             A AVE IHAYSL+HDDLPAMDDD+LRRG+PT H QFDEA AIL GD LQ+LAF+ L +
Sbjct: 67  GAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKQFDEACAILAGDGLQSLAFSALLD 126

Query: 126 GDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMR 185
             LS      R+ M+ ALA A+G  GM  GQA+DL +    +    LE +HR+KTGAL+ 
Sbjct: 127 PALSDCPAQVRLDMVSALALAAGPAGMVGGQAIDLGSVGLKLDQSALEYMHRHKTGALIE 186

Query: 186 CAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNK 245
            ++RLGALA+G    A L  L  YA A+GLAFQVQDDILD+ SDT+TLGK QG+D   +K
Sbjct: 187 ASVRLGALASGRATPAQLQALQTYARAIGLAFQVQDDILDVESDTQTLGKRQGADIARDK 246

Query: 246 STYPALLGLEGAQQKAHTLLQEALLALEAIPYNTEHLEEFARYVVERKN 294
            TYPALLGL+ A+  A  L  +AL AL       E L + ARY+VER++
Sbjct: 247 PTYPALLGLDAAKAYALELRDQALAALRPFDAAAEPLRDLARYIVERRS 295