Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., octaprenyl-diphosphate synthase from Pseudomonas fluorescens FW300-N2E3

 Score = 97.4 bits (241), Expect = 4e-25
 Identities = 72/234 (30%), Positives = 119/234 (50%), Gaps = 22/234 (9%)

Query: 41  GGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCH 100
           GGKR RP LV + G+ LG E  D+   A+ +E +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDMRLLAATIEFLHTATLLHDDV--VDMSGMRRGRSTAN 100

Query: 101 IQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDL 160
             +  A ++L GD L + +F ++         E   + +++ L++A+  + +  G+ L L
Sbjct: 101 AMWGNAPSVLVGDFLYSRSFEMMV--------ELGSMPVMKILSQAT--RIIAEGEVLQL 150

Query: 161 AAENRLISLEE--LETIHRNKTGALMRCAIRLGALAAG---EKGRAMLPHLDRYAEAVGL 215
           +      + EE  +E I R KT  L   +    A  AG   E+  A    L  + + +G+
Sbjct: 151 SKVRDASTTEETYMEVI-RGKTAMLFEASTHSAAALAGATPEQSEA----LRTFGDHLGV 205

Query: 216 AFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQKAHTLLQEAL 269
           AFQ+ DD+LD   D ETLGK  G D    K T P +  +     +   L++ A+
Sbjct: 206 AFQLVDDLLDYKGDAETLGKNVGDDLAEGKPTLPLIYTMREGTPEQAALVRRAI 259