Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., Geranylgeranyl pyrophosphate synthase from Pseudomonas stutzeri RCH2

 Score =  264 bits (675), Expect = 2e-75
 Identities = 146/294 (49%), Positives = 188/294 (63%), Gaps = 4/294 (1%)

Query: 5   LSSYQQRNNQQLDQWLNRIPFQTLPLIE----AMRYGLLLGGKRARPYLVYITGQMLGCE 60
           +  YQ+   Q++D  L  +    LP +E    AMRY ++ GGKR RP LVY   + L  +
Sbjct: 3   IGDYQKSCQQRVDGCLETLFVAPLPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALNGD 62

Query: 61  LSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAF 120
            +  D  A AVE IHAYSL+HDDLPAMDDD+LRRG+PT H  FDEA AIL GD LQ+LAF
Sbjct: 63  KASADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 122

Query: 121 TILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKT 180
             +A+   +    T R+ M   LA A+G  GM  GQA+DL +    +  + LE +HR+KT
Sbjct: 123 EAMAQAAHNPQDATLRLRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKT 182

Query: 181 GALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSD 240
           GAL+  +++LGALA+G      L  L +YA A+GLAFQVQDDILD+ SDT TLGK QG+D
Sbjct: 183 GALIEASVQLGALASGRADADNLASLSQYARAIGLAFQVQDDILDVESDTATLGKHQGAD 242

Query: 241 QELNKSTYPALLGLEGAQQKAHTLLQEALLALEAIPYNTEHLEEFARYVVERKN 294
              +K TYPALLG++ A+  A  L  +AL AL       E L E ARY+VER+N
Sbjct: 243 IARDKPTYPALLGMDAAKAYALELRDQALHALRPFDIAAEPLRELARYIVERRN 296