Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., Geranylgeranyl pyrophosphate synthase from Pseudomonas stutzeri RCH2

 Score =  130 bits (328), Expect = 3e-35
 Identities = 99/268 (36%), Positives = 142/268 (52%), Gaps = 10/268 (3%)

Query: 11  RNNQQLDQWLN-RIPFQTLPLIE---AMRYGLLLGGKRARPYLVYITGQMLGCELSDLDT 66
           R  +Q+D+ L  R+PF    L +   A+R G L  GKR RP L+ +    LG +      
Sbjct: 18  RLRRQVDERLALRLPFPESELDKVSLALREGTLAPGKRLRPLLLLLALSDLGIDPDIGLD 77

Query: 67  PASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEG 126
            A A+E IHA SL  DD+P MD+  LRRG+PT H++F E  A+L   AL + A+ I A  
Sbjct: 78  LACALEMIHAASLFLDDMPCMDNASLRRGQPTIHLRFGEDVAVLASVALLSHAYGITATA 137

Query: 127 DLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRC 186
                   QR   +  LA + GAQG+  GQ  DL        L+ +   ++ KT +L   
Sbjct: 138 --PRLTPRQRNDAVAILARSVGAQGLVRGQFRDLHGAQEAQQLDAVIATNQLKTASLFTA 195

Query: 187 AIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKS 246
           A+ + AL AG + R    HL  +A  +GLAFQ+ DDI D ++  +T GK     Q+  K+
Sbjct: 196 ALEVAALLAGAE-RTRTRHLQGFANQLGLAFQLLDDIADGLTPEQT-GK--NCQQDRTKA 251

Query: 247 TYPALLGLEGAQQKAHTLLQEALLALEA 274
           T  +LLG + A+Q+  T  + AL  L+A
Sbjct: 252 TVVSLLGQQAAEQQLATHREAALTHLDA 279