Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., Geranylgeranyl pyrophosphate synthase from Pseudomonas stutzeri RCH2

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 71/244 (29%), Positives = 121/244 (49%), Gaps = 15/244 (6%)

Query: 28  LPLIEAMR-YGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPA 86
           +PL+E +  Y    GGKR RP LV ++G  LG +   L   A+ +E +H  +L+HDD+  
Sbjct: 29  VPLVEKIGDYITSAGGKRLRPLLVLLSGSALGHQGDQLRLLAAIIEFLHTSTLLHDDV-- 86

Query: 87  MDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAMLQALAEA 146
           +D   +RRG+ T +  +  A ++L GD L   +F ++ E D         + +++ +++A
Sbjct: 87  VDMSGMRRGRSTANALWGNAPSVLVGDFLYARSFEMMVELD--------SMPVMRIISQA 138

Query: 147 SGAQGMCLGQALDLAAENRLISLEELET-IHRNKTGALMRCAIRLGALAAGEKGRAMLPH 205
           +    +  G+ L L+      + EE+   + R KT  L   +    A  AG         
Sbjct: 139 TRV--IAEGEVLQLSKVRDASTTEEIYMEVIRGKTAMLFEASTHSAATLAGAS-EEQREA 195

Query: 206 LDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQKAHTLL 265
           L  + + +G+AFQ+ DD+LD   D ETLGK  G D    K T P +  +     +   L+
Sbjct: 196 LRTFGDHLGIAFQLVDDLLDYQGDAETLGKNVGDDLAEGKPTLPLIYTMREGTTEQAALV 255

Query: 266 QEAL 269
           ++A+
Sbjct: 256 RKAI 259