Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  255 bits (651), Expect = 9e-73
 Identities = 147/282 (52%), Positives = 178/282 (63%), Gaps = 4/282 (1%)

Query: 11  RNNQQLDQWLNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASA 70
           R  +QLD  L         L  AMR+ +L GGKR RP LVY +G + G E   LD PA A
Sbjct: 12  RTERQLDACLPSPALAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAEEGSLDAPAVA 71

Query: 71  VECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSA 130
           VE IHAYSL+HDDLPAMDDD LRRG PT HI FDEATAIL GDALQ  AF +LAE    A
Sbjct: 72  VELIHAYSLVHDDLPAMDDDALRRGHPTVHIAFDEATAILAGDALQARAFELLAEAPADA 131

Query: 131 AGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRL 190
           A    RV  LQ+LA A+GA GMC GQALD+ A  ++ +LE L+ +H  KTGAL+R A+R+
Sbjct: 132 A---LRVGWLQSLASAAGAAGMCGGQALDIDATGQVQALEALQRMHALKTGALIRAAVRM 188

Query: 191 GALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPA 250
           G L  G  G A    LD +A+A+GLAFQV+DDILD+ S +  LGK  G D   +KSTYPA
Sbjct: 189 GVLTGG-AGIADQQRLDAFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQSKSTYPA 247

Query: 251 LLGLEGAQQKAHTLLQEALLALEAIPYNTEHLEEFARYVVER 292
           LLG++GA+ K   L       L     +   L    R+ V+R
Sbjct: 248 LLGMDGAKTKLAELASHMHALLLPYGESGATLASLGRFAVDR 289