Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., polyprenyl synthetase family protein from Synechocystis sp000284455 PCC 6803

 Score =  201 bits (512), Expect = 1e-56
 Identities = 121/268 (45%), Positives = 161/268 (60%), Gaps = 9/268 (3%)

Query: 30  LIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDD 89
           + EAMRY LL GGKR RP L     ++ G + +     A A+E IH  SLIHDDLP+MD+
Sbjct: 39  IYEAMRYSLLAGGKRLRPILCITACELCGGDEALALPTACALEMIHTMSLIHDDLPSMDN 98

Query: 90  DELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAMLQALAEAS-- 147
           D+ RRGKPT H  + E  AIL GD L   AF    E  ++   +    A+LQ +A     
Sbjct: 99  DDFRRGKPTNHKVYGEDIAILAGDGLLAYAF----EYVVTHTPQADPQALLQVIARLGRT 154

Query: 148 -GAQGMCLGQALDLAAENRL-ISLEELETIHRNKTGALMRCAIRLGALAAGEKGRAMLPH 205
            GA G+  GQ LDL +E R  I+ E L  IH +KTGAL+  ++  GA+ AG  G      
Sbjct: 155 VGAAGLVGGQVLDLESEGRTDITPETLTFIHTHKTGALLEASVLTGAILAGATGEQQ-QR 213

Query: 206 LDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQKAHTLL 265
           L RYA+ +GLAFQV DDILDI +  E LGK  G D +  K+TYP+LLGLE ++ +A +L+
Sbjct: 214 LARYAQNIGLAFQVVDDILDITATQEELGKTAGKDVKAQKATYPSLLGLEASRAQAQSLI 273

Query: 266 QEALLALEAIPYNTEHLEEFARYVVERK 293
            +A++ALE    + E L+  A Y+V RK
Sbjct: 274 DQAIVALEPFGPSAEPLQAIAEYIVARK 301