Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., Trans-hexaprenyltranstransferase from Synechococcus elongatus PCC 7942

 Score = 93.2 bits (230), Expect = 7e-24
 Identities = 79/222 (35%), Positives = 104/222 (46%), Gaps = 23/222 (10%)

Query: 41  GGKRARPYLVYITGQ--MLGCELSDLDTP-ASAVECIHAYSLIHDDLPAMDDDELRRGKP 97
           GGKR RP +V +  +  M G E++      A   E IH  SL+HDD+  +D+  LRRG P
Sbjct: 44  GGKRLRPAVVLLLSRATMPGQEITPRHRRLAEITEMIHTASLVHDDV--VDESSLRRGIP 101

Query: 98  TCHIQFDEATAILTGDALQTLAFTILAEGD-LSAAGETQRVAMLQALAEASGAQGMCLGQ 156
           T H  F    A+L GD L   A   LA  D L+      +V M   LAE    QG+    
Sbjct: 102 TVHSSFSNRVAVLAGDFLFAQASWHLAHLDSLTVVKLLSQVIM--DLAEGEILQGL---- 155

Query: 157 ALDLAAENRL---ISLEELETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAV 213
                  NR    +S+E        KT +L+  + R   + +G     +   L  Y  ++
Sbjct: 156 -------NRFDSSLSIEVYLDKSYYKTASLLANSARAAGVLSGSS-ETVCDALYDYGRSL 207

Query: 214 GLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLE 255
           GLAFQ+ DDILD     E LGKP GSD      T PAL  +E
Sbjct: 208 GLAFQIVDDILDFTGSEEVLGKPAGSDLASGNLTAPALYAIE 249