Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., farnesyl-diphosphate synthase from Synechococcus elongatus PCC 7942

 Score =  202 bits (514), Expect = 8e-57
 Identities = 125/293 (42%), Positives = 173/293 (59%), Gaps = 5/293 (1%)

Query: 5   LSSYQQRNNQQLDQWLNRI-PFQTLPLI-EAMRYGLLLGGKRARPYLVYITGQMLGCELS 62
           L SY +   +Q++  LN I P Q  PLI E+MRY LL  GKR RP L   + ++ G   +
Sbjct: 11  LKSYLKERQRQVEAALNAILPPQDPPLIYESMRYSLLAEGKRLRPILCLASCELAGGTAA 70

Query: 63  DLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTI 122
                A A+E +H  SLIHDDLP+MD+D+ RRG+PT H  + E  AIL GDAL T AF  
Sbjct: 71  IALPTACALEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAGDALLTYAFEA 130

Query: 123 LAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENR-LISLEELETIHRNKTG 181
           +A        + + + ++ ALA A GA+G+  GQ +DL +E R  ++LE L  IH +KTG
Sbjct: 131 IARHTPEVPAD-RVLKVIAALARAVGAEGLVGGQVVDLQSEGRDDVNLETLHYIHTHKTG 189

Query: 182 ALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQ 241
           AL+  ++  GA+ AG     +   L  YA+ +GLAFQV DDILDI +  E LGK  G D 
Sbjct: 190 ALLEVSVVSGAILAG-ASEELQEQLRTYAQKIGLAFQVIDDILDITATAEELGKTAGKDL 248

Query: 242 ELNKSTYPALLGLEGAQQKAHTLLQEALLALEAIPYNTEHLEEFARYVVERKN 294
              K+TYP+LLGL+ +++ A  L+ EA  A+ A     + L   A Y+  RK+
Sbjct: 249 AAKKATYPSLLGLDASREYADQLITEAKAAIAAFGAEADPLRAIADYITARKH 301