Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., trans-hexaprenyltranstransferase (RefSeq) from Shewanella amazonensis SB2B

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 16/231 (6%)

Query: 41  GGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCH 100
           GGKR RP L  +  + +          A+ +E IH  SL+HDD+  +D+  LRRG+ T +
Sbjct: 53  GGKRLRPLLSVLAARAVNYNGEGHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 110

Query: 101 IQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDL 160
             F  + ++L GD L T +F ++ E           + +LQ LA+A+    +  G+ L L
Sbjct: 111 ALFGNSASVLVGDFLYTRSFQMMTE--------LGSMKVLQVLADATNV--LAEGEVLQL 160

Query: 161 AAENRLISLEE--LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQ 218
              N   + EE  +  I+  KT  L   A RL A+ AG   +      D Y + +G AFQ
Sbjct: 161 MNCNDPNTTEESYMRVIYC-KTAKLFEAATRLAAVLAGSDEKVEEALAD-YGKYLGTAFQ 218

Query: 219 VQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQKAHTLLQEAL 269
           + DD+LD  SD E LGK  G D    K T P +  +    ++   L++ A+
Sbjct: 219 LIDDLLDYTSDAEELGKNIGDDLAEGKPTLPLIYAIGHGNEREQGLIRNAI 269