Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., Polyprenyl synthetase (NCBI) from Rhodospirillum rubrum S1H

 Score =  132 bits (333), Expect = 7e-36
 Identities = 92/269 (34%), Positives = 138/269 (51%), Gaps = 18/269 (6%)

Query: 9   QQRNNQQLDQWLNRIPFQTLP--LIEAMRYGLLLGGKRARPYLVYITGQMLGCEL-SDLD 65
           +Q  +  L+  + R      P  L +AMR+ +  GG R RP L        G +L +  D
Sbjct: 4   RQHIDNVLEATMTRADLPDAPPLLAKAMRHAVFPGGGRLRPRLTLAVAAACGNDLPAAAD 63

Query: 66  TPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAE 125
             A+A+E +H  SL+HDDLP  DD   RRG+ + H+ + E  A+L GDAL  +AF  LA 
Sbjct: 64  AAAAAIELLHCASLVHDDLPCFDDAHSRRGQASVHVAYGEPLAVLAGDALIVMAFQGLAS 123

Query: 126 GDLSAAGETQRVAMLQAL-AEASG-AQGMCLGQALDLAAENRLISLEELETIHRNKTGAL 183
           G    A   +R+ +L  + A+A G   G+C GQA +     +L   +      R KTGAL
Sbjct: 124 G---LAMVPERLPLLLGIVADAVGMPAGICAGQAWESEPTVKLAEYQ------RAKTGAL 174

Query: 184 MRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQEL 243
              +   GA AAG + R+         E +G A+QV DD+ D+ +D   LGKP G D  L
Sbjct: 175 FAASTMAGAAAAGREARSW----RMLGECLGEAYQVADDLRDVAADPAELGKPVGRDAAL 230

Query: 244 NKSTYPALLGLEGAQQKAHTLLQEALLAL 272
            +      LG+ GA ++  +L+ +A+ ++
Sbjct: 231 GRPNAVGHLGIVGAVRRLESLVADAVASV 259