Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., geranyltranstransferase IspA from Phaeobacter inhibens DSM 17395

 Score =  200 bits (508), Expect = 4e-56
 Identities = 115/262 (43%), Positives = 165/262 (62%), Gaps = 11/262 (4%)

Query: 33  AMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDEL 92
           AMRY +  GGK  R +LV  + ++ G   +     A A+ECIHAYSL+HDDLP MDDD+L
Sbjct: 45  AMRYAVT-GGKMLRGFLVLESARLHGVAEAAALEAALAIECIHAYSLVHDDLPCMDDDDL 103

Query: 93  RRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGM 152
           RRG+PT H ++DEA A+L GD+LQT AF +LA+  +        + +++ LA+ASG  GM
Sbjct: 104 RRGQPTVHRKWDEAMAVLAGDSLQTFAFELLADPRIG----PHALTLIRGLAQASGKDGM 159

Query: 153 CLGQALDLAAE--NRLISLEELETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYA 210
             GQ LD+AAE   R + LE++  +   KTG L+  +   GA+ AG    A    L RYA
Sbjct: 160 VSGQMLDIAAETATRPLDLEQITHLQNRKTGCLISWSATAGAVMAG----ADEAPLRRYA 215

Query: 211 EAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQKAHTLLQEALL 270
           +A+GLAFQ+ DDILD+  D   +GK    D +  K+T+ +LLGL+ A+++A TL+++A  
Sbjct: 216 DALGLAFQIADDILDVEGDAAKVGKAVRKDADAGKATFVSLLGLDAAKKRAKTLMEQACD 275

Query: 271 ALEAIPYNTEHLEEFARYVVER 292
           AL       E L++ AR+V+ R
Sbjct: 276 ALTPYGDAAETLKDTARFVISR 297