Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., trans-hexaprenyltranstransferase (RefSeq) from Shewanella loihica PV-4

 Score =  100 bits (248), Expect = 6e-26
 Identities = 82/285 (28%), Positives = 138/285 (48%), Gaps = 21/285 (7%)

Query: 2   IEALSSYQQRNNQQLDQWLNRIPFQTLPLIEAMRYGLLLGG-KRARPYLVYITGQMLGCE 60
           + A+      + + +DQ + +     + LI  + + ++ GG KR RP L  +  + +  E
Sbjct: 3   LNAIRQLADADMKAVDQLIYKQLESDVALINQLGFYIINGGGKRMRPLLSILAARAIAYE 62

Query: 61  LSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAF 120
                  A+ VE IH  SL+HDD+  +D+  LRRG+ T +  F  + ++L GD L T +F
Sbjct: 63  GEAHLKLAAIVEFIHTASLLHDDV--VDESMLRRGRETANALFGNSASVLVGDFLYTRSF 120

Query: 121 TILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEE--LETIHRN 178
            ++ E         + + +L+ LA+A+    +  G+ L L   N   + EE  +  I+  
Sbjct: 121 QMMTE--------LKSMEVLEVLADATNV--LAEGEVLQLMNCNDPDTSEESYMRVIYC- 169

Query: 179 KTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQG 238
           KT  L   A RL  + A E    +   L  Y + +G AFQ+ DD+LD  +DTE LGK  G
Sbjct: 170 KTAKLFEAATRLAGVLA-ESSIEVQTALADYGKYLGTAFQLTDDLLDYTADTEALGKNIG 228

Query: 239 SDQELNKSTYPALLGLEGAQQKAHTLLQEALLALEAIPYNTEHLE 283
            D    K T P +  +    +    L+++A+   +     TEH++
Sbjct: 229 DDLAEGKPTLPLIYAIANGNELERQLIRDAIEKGD----GTEHID 269