Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., Possible polyprenyl synthetase IdsB (polyprenyl transferase) (polyprenyl diphosphate synthase) from Mycobacterium tuberculosis H37Rv

 Score =  109 bits (273), Expect = 8e-29
 Identities = 79/237 (33%), Positives = 114/237 (48%), Gaps = 14/237 (5%)

Query: 42  GKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHI 101
           GK  R  LVY      G ++ D    ++AVE +H ++L+HDD+  MD D  RRG+PT   
Sbjct: 69  GKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWS 126

Query: 102 QFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAMLQALAEAS-GAQGMCLGQALDL 160
            +    AIL GDAL   A  IL        G T     ++A+         +C+GQ  D 
Sbjct: 127 VWGVGVAILLGDALHATAVRILT-------GLTDECVAVRAIRRLQMSCLDLCIGQFEDC 179

Query: 161 AAENRL-ISLEELETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQV 219
             E +  +++++   +   KT AL  C   LGAL A     A +  L+R+   +GLAFQ 
Sbjct: 180 LLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVANADD-ATIAALERFGHELGLAFQC 238

Query: 220 QDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQKAHTL--LQEALLALEA 274
            DD++ I  D    GKP G+D    K+T P +  L    + A  L  L +A  A+ A
Sbjct: 239 VDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALNSRSEAATELAALYQAPAAMTA 295