Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

 Score =  145 bits (366), Expect = 1e-39
 Identities = 98/257 (38%), Positives = 143/257 (55%), Gaps = 18/257 (7%)

Query: 15  QLDQWLNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECI 74
           ++D  L +   +   L  A ++ LL GGKR RPYL  +T  +   EL+++  PA +VE I
Sbjct: 10  KIDSELKKYMEKDTKLYGASKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSVELI 69

Query: 75  HAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAE-GDLSAAGE 133
           H Y+L+HDD+  MD+D+ RRG PT H  + E  AIL GD L   AF  L+   D + A E
Sbjct: 70  HNYTLVHDDI--MDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAHE 127

Query: 134 TQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGAL 193
             +V + +A  E      +C GQ  D+  E R  +L+E   +   KTGAL+   + +GA+
Sbjct: 128 VLKV-LSKACVE------VCEGQTEDMEFEERFPTLDEYLEMISKKTGALIVAPVEIGAV 180

Query: 194 AAG---EKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPA 250
            A    E+  A    L  YA+ +G+ FQ+QDD+LD+I D +T+GKP GSD    K T   
Sbjct: 181 MADCTPEEREA----LCNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMV 236

Query: 251 LLGLEG-AQQKAHTLLQ 266
           +  +E  ++ K   LLQ
Sbjct: 237 IHAMENLSEDKKERLLQ 253