Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., geranyltranstransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  313 bits (802), Expect = 3e-90
 Identities = 167/293 (56%), Positives = 208/293 (70%), Gaps = 2/293 (0%)

Query: 1   MIEALSSYQQRNNQQLDQWLNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCE 60
           ++ A+  YQ R + QL Q  + +      L  AM +G LLGGKR RP+LVY  GQM G  
Sbjct: 2   LVNAIKEYQLRVDDQLKQRFSTLEDTAPQLKAAMTHGALLGGKRIRPFLVYSVGQMFGVP 61

Query: 61  LSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAF 120
           L  LD  A+A+ECIHAYSLIHDDLPAMDDD LRRG+PT HI FDEATAIL GDALQTLAF
Sbjct: 62  LEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTLAF 121

Query: 121 TILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKT 180
            I+ E       E Q +AM++ALA+ASG +GMC GQA+DLA+ ++ I L+ L  +H  KT
Sbjct: 122 EIVTEAVPGITSE-QHIAMVRALAKASGYRGMCGGQAIDLASTDKHIDLKALTQLHNMKT 180

Query: 181 GALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSD 240
           GAL+ CA+ L AL A    +     +  +A AVGLAFQVQDDILDII+ TE LGKPQGSD
Sbjct: 181 GALISCAVEL-ALIAANAPKDQYQTMMEFAHAVGLAFQVQDDILDIIATTEELGKPQGSD 239

Query: 241 QELNKSTYPALLGLEGAQQKAHTLLQEALLALEAIPYNTEHLEEFARYVVERK 293
            E NKST+P LLGL+GA+  A  L+QEAL AL  +PYN++ + +FARY++ER+
Sbjct: 240 AESNKSTFPQLLGLQGAKDTATQLIQEALSALAKLPYNSQLIADFARYIIERR 292