Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., Polyprenyl synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  220 bits (560), Expect = 3e-62
 Identities = 127/254 (50%), Positives = 167/254 (65%), Gaps = 7/254 (2%)

Query: 41  GGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCH 100
           GGKR R  LV  T  + G         A+A+EC+HAYSL+HDDLPAMDDD+LRRG+PT H
Sbjct: 41  GGKRLRGVLVLETAWLHGVAPERAVYAAAAIECLHAYSLVHDDLPAMDDDDLRRGQPTVH 100

Query: 101 IQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDL 160
           +++DEA+AIL GDALQTLAF  L++  ++       +A++++LA+ASGA GM LGQALD+
Sbjct: 101 VKWDEASAILVGDALQTLAFEALSDPRMT-DDPAVALALVRSLAQASGAAGMVLGQALDI 159

Query: 161 AAENRL--ISLEELETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQ 218
           AAE     +SL+E+  +   KTGAL+R +   GAL A    RA    L RYAEA+GLAFQ
Sbjct: 160 AAETAAAPLSLDEITRLQAGKTGALIRWSAEAGALLA----RADPAPLRRYAEAIGLAFQ 215

Query: 219 VQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQKAHTLLQEALLALEAIPYN 278
           + DDILD+  D E  GK    D E  K+T+ +LLGLE A+ +A  L+ EA  AL+     
Sbjct: 216 IADDILDVTGDAEKAGKRLQKDAEAGKATFVSLLGLEAARARAAALVAEAEAALQPYGAE 275

Query: 279 TEHLEEFARYVVER 292
            E L E AR+V+ R
Sbjct: 276 AETLCELARFVIAR 289