Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., Polyprenyl synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  106 bits (265), Expect = 6e-28
 Identities = 78/231 (33%), Positives = 117/231 (50%), Gaps = 21/231 (9%)

Query: 22  RIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIH 81
           RIP  T  L+EA       GGKR RP L   T ++ G         A+ VE IH  +L+H
Sbjct: 41  RIPEVTAHLVEA-------GGKRLRPMLTLATARLCGYTGPYHVHLAATVEFIHTATLLH 93

Query: 82  DDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAMLQ 141
           DD+  +D+   RRG+PT ++ +D  +++L GD L   +F ++ E        T  + +L 
Sbjct: 94  DDV--VDESNQRRGRPTANLLWDNQSSVLVGDYLFARSFQLMVE--------TGSLRVLD 143

Query: 142 ALAEASGAQGMCLGQALDLAAENRLISLEELET-IHRNKTGALMRCAIRLGALAAGEKGR 200
            LA A+    +  G+ L L+A   L + E++   + R KT AL   A  +G + AG    
Sbjct: 144 ILANAAAT--IAEGEVLQLSAAQDLATDEDIYLKVVRGKTAALFSAATEVGGVIAGAD-E 200

Query: 201 AMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPAL 251
           A +  L  Y +A+G+AFQ+ DD+LD   D+   GK  G D    K T P +
Sbjct: 201 AQVRALFTYGDALGIAFQIVDDLLDYGGDSTKTGKNIGDDFRERKLTLPVI 251