Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., trans-isoprenyl diphosphate synthase from Caulobacter crescentus NA1000

 Score =  102 bits (254), Expect = 1e-26
 Identities = 77/215 (35%), Positives = 106/215 (49%), Gaps = 14/215 (6%)

Query: 41  GGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCH 100
           GGKR RP +     ++ G +       A+AVE IH  +L+HDD+  +D  +LRRGK   H
Sbjct: 55  GGKRLRPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAAH 112

Query: 101 IQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDL 160
           + +  A ++L GD L   AF ++ E        T  +  L+ LA AS    +  G+ L L
Sbjct: 113 LIWGGAQSVLVGDFLFARAFELMVE--------TNSMKALEILARASRV--IAEGEVLQL 162

Query: 161 AAENRL-ISLEELETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQV 219
              + L +S      I + KT  L   A   GA++AG    A    L  Y   +GLAFQ+
Sbjct: 163 MRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDV-AKSEALRDYGLNLGLAFQL 221

Query: 220 QDDILDIISDTETLGKPQGSDQELNKSTYPALLGL 254
            DD LD    TETLGK  G D    K+T P LL +
Sbjct: 222 ADDALDYGGATETLGKNAGDDFREGKATLPLLLAI 256