Pairwise Alignments

Query, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., dimethylallyltransferase/geranyltranstransferase from Caulobacter crescentus NA1000

 Score =  202 bits (513), Expect = 1e-56
 Identities = 124/280 (44%), Positives = 162/280 (57%), Gaps = 5/280 (1%)

Query: 16  LDQWLNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIH 75
           LD+ L R       L EAMRY  L  GKR RP+    TG+M       +   A A+ECIH
Sbjct: 19  LDELLPRADGPESRLTEAMRYAALGPGKRLRPFFALETGKMFDLPERPVLRAACALECIH 78

Query: 76  AYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAGETQ 135
           AYSL+HDDLPAMDDD++RRG+PT H Q+DEATAIL GDALQT AF I+A  D    G   
Sbjct: 79  AYSLVHDDLPAMDDDDVRRGRPTVHKQYDEATAILAGDALQTAAFEIMAHPDTHDDGHV- 137

Query: 136 RVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGALAA 195
           R  +++ LA ASGA+GMC GQ +DL        L  +  + R KTGAL+  A  +  + A
Sbjct: 138 RSELVRKLAIASGARGMCGGQMIDLLGVRD--DLGAVARMQRLKTGALIAFAFEIPLIIA 195

Query: 196 GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQ-GSDQELNKSTYPALLGL 254
             K  +    L  +A+ +GLA+Q+ DDILD   D ETLGK   G D    K+ Y  LLGL
Sbjct: 196 RAK-ESERSALMAFAQDLGLAYQIVDDILDAEGDEETLGKAAGGKDAAKGKANYVTLLGL 254

Query: 255 EGAQQKAHTLLQEALLALEAIPYNTEHLEEFARYVVERKN 294
           + A+++   L ++    LE      EHL     +V++R+N
Sbjct: 255 DAAKERVTLLAEQTRSHLEIFGERAEHLRASVDFVLDRRN 294