Pairwise Alignments

Query, 626 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) from Sinorhizobium meliloti 1021

 Score = 59.3 bits (142), Expect = 3e-13
 Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 43/274 (15%)

Query: 334 AQDPKLMAITPAMREGSGMVRFSKEYPSQY-----FDVAIAEQHAVTLATGMAIAGYHPI 388
           A+D  ++     +    G+ R ++   ++Y     FD  I+E   V  A GMA  G  P 
Sbjct: 19  ARDDNVVVFGEDVGYFGGVFRCTQGLQAKYGKTRCFDTPISESGIVGTAIGMAAYGLKPC 78

Query: 389 VAI-YSTFLQRGYDQLIHDVAIMNL--------PVMFAIDRAGIVGADGQTHQGAFDLSY 439
           V I ++ ++   YDQL  + A +          P++  +   G +   GQTH  + +  +
Sbjct: 79  VEIQFADYMYPAYDQLTQEAARIRYRSNGDFTCPIVVRMPTGGGIFG-GQTHSQSPEALF 137

Query: 440 MRCIPNMLIMAPADENECRQMLYTGHQHQGPSAVRYPRG--NG----------------- 480
              +  + ++ P++  + + +L +  +   P     P+   NG                 
Sbjct: 138 TH-VCGLKVVVPSNPYDAKGLLISAIEDPDPVMFLEPKRLYNGPFDGHHERPVTAWSKHE 196

Query: 481 MGVELESSFTALEIGKGRLMRESTACEGEKVAILSFGTLLPNALQAAEK--LNATVADMR 538
           +G   +  +T + IGK  + R+     G  V ++++GT++  AL AAE+  ++A V D+R
Sbjct: 197 LGDVPDGHYT-IPIGKAEIRRK-----GSGVTVIAYGTMVHVALAAAEETGIDAEVIDLR 250

Query: 539 FVKPLDEALIKQLAQTHDVLVTLEENAIAGGAGA 572
            + PLD   I Q A+     V + E  +  G GA
Sbjct: 251 SLLPLDLETIVQSAKKTGRCVVVHEATLTSGFGA 284