Pairwise Alignments

Query, 626 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., 1-deoxy-D-xylulose-5-phosphate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  930 bits (2403), Expect = 0.0
 Identities = 459/627 (73%), Positives = 529/627 (84%), Gaps = 6/627 (0%)

Query: 1   MTLDISKYPTLALANTPDELRSLPKEVLPKLCDELRTYLLNSVSQSSGHLASGLGTVELT 60
           M+LDIS YP LALA+TP+ELR LP+  L +L DELR +LL SV  SSGH ASGLGTVELT
Sbjct: 1   MSLDISNYPLLALASTPEELRQLPQSALKQLSDELRQFLLTSVGISSGHFASGLGTVELT 60

Query: 61  VALHYVYHTPFDHLIWDVGHQAYPHKILTGRRDQMPTIRQKDGLHPFPWREESEYDTLSV 120
           VALHYVY+TPFD LIWDVGHQAYPHKILTGRRD+M TIRQK+GLHPFPWREES+YDT SV
Sbjct: 61  VALHYVYNTPFDRLIWDVGHQAYPHKILTGRRDKMHTIRQKNGLHPFPWREESQYDTFSV 120

Query: 121 GHSSTSISAALGMAICAGKEGKDRKVVSVIGDGAITAGMAFEAMNHAGDVHPDMLVVLND 180
           GHSSTSISAALGMA+ A KE   RKVV+VIGDGAIT GMAFEA+NHAGD+H DMLVVLND
Sbjct: 121 GHSSTSISAALGMAVTAEKEALGRKVVAVIGDGAITGGMAFEALNHAGDLHKDMLVVLND 180

Query: 181 NEMSISENVGALNNHLAQVLSGSLYTSIREGGKKVLSGIPPIKELVRRTEEHLKGMVVPG 240
           NEMSISENVGALNNHLA+++SG LYT+IREGGKKVL G+P IKE+ +RTEEHLKGMVVPG
Sbjct: 181 NEMSISENVGALNNHLAKLMSGRLYTTIREGGKKVLKGMPVIKEMAKRTEEHLKGMVVPG 240

Query: 241 TLFEELGFNYIGPVDGHDVLELIKTLKNMRELKGPQFLHVMTKKGKGYAPAEKDPIGYHG 300
           TLFEELGFNYIGP+DGHDV  L++TL NMR+LKGPQFLH+MTKKGKGY PAEKDPIG+H 
Sbjct: 241 TLFEELGFNYIGPIDGHDVNGLVETLSNMRDLKGPQFLHIMTKKGKGYEPAEKDPIGWHA 300

Query: 301 VPKFDPSHHSLPKSSNTKPTFSKIFGDFLCDMAAQDPKLMAITPAMREGSGMVRFSKEYP 360
           VPKFDP+    P +    PTFS++FG +LCD+AA+D K++AITPAMREGSGMV FS+ +P
Sbjct: 301 VPKFDPTQFRKPATKPGLPTFSQVFGKWLCDIAAKDEKVLAITPAMREGSGMVEFSQRFP 360

Query: 361 SQYFDVAIAEQHAVTLATGMAIAGYHPIVAIYSTFLQRGYDQLIHDVAIMNLPVMFAIDR 420
            QYFD AIAEQHAVTL  G A  GY  +VAIYS+FLQRGYDQLIHDVA+  LPV+FAIDR
Sbjct: 361 QQYFDAAIAEQHAVTLGAGFACEGYKAVVAIYSSFLQRGYDQLIHDVALQRLPVLFAIDR 420

Query: 421 AGIVGADGQTHQGAFDLSYMRCIPNMLIMAPADENECRQMLYTGH-QHQGPSAVRYPRGN 479
            GIVGADG THQGAFDLSYMRCIPNM+IMAP+DENECRQM YTG+  ++GPSAVRYPRG+
Sbjct: 421 GGIVGADGATHQGAFDLSYMRCIPNMVIMAPSDENECRQMFYTGYCYNEGPSAVRYPRGS 480

Query: 480 GMGVELESSFTALEIGKGRLMRESTACEGEKVAILSFGTLLPNALQAAEKLNATVADMRF 539
             G E     TAL IGKG + R     +G+K+AIL+FGT L  AL AAE LNATVADMRF
Sbjct: 481 ATGAEQIEEMTALPIGKGVMRR-----QGQKIAILNFGTTLAAALTAAESLNATVADMRF 535

Query: 540 VKPLDEALIKQLAQTHDVLVTLEENAIAGGAGAGVIEFLMKEKQLKPVLNLGLPDQFIVQ 599
           VKPLDEAL+ +LA +HDVLVT+EENAI GGAG+GV+EFL  + +LKP+L +G+PD+FI  
Sbjct: 536 VKPLDEALLLELAASHDVLVTVEENAIMGGAGSGVLEFLASKNRLKPLLQIGIPDEFIKH 595

Query: 600 GTQEEMHAELGLDGAGIERAIRDYLAK 626
           G  EE+ +ELGLD AGIE  IR ++ +
Sbjct: 596 GGPEEILSELGLDAAGIEGQIRAFIER 622