Pairwise Alignments

Query, 626 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., 1-deoxy-D-xylulose-5-phosphate synthase Dxs from Phaeobacter inhibens DSM 17395

 Score =  543 bits (1399), Expect = e-159
 Identities = 298/636 (46%), Positives = 410/636 (64%), Gaps = 21/636 (3%)

Query: 4   DISKYPTLALANTPDELRSLPKEVLPKLCDELRTYLLNSVSQSSGHLASGLGTVELTVAL 63
           D  + P L     P +L+SL    L ++  ELR   +++VS + GHL +GLG VELT AL
Sbjct: 3   DRPQTPLLDQITRPADLKSLSDAQLTQVAQELRQETISAVSVTGGHLGAGLGVVELTTAL 62

Query: 64  HYVYHTPFDHLIWDVGHQAYPHKILTGRRDQMPTIRQKDGLHPFPWREESEYDTLSVGHS 123
           H V+ TP D +IWDV HQ YPHKILTGRRD++ T+R KDGL  F  R ES +D     HS
Sbjct: 63  HAVFDTPRDKIIWDVSHQCYPHKILTGRRDRIRTLRMKDGLSGFTKRSESPFDPFGAAHS 122

Query: 124 STSISAALGMAICAGKEGKDRK----VVSVIGDGAITAGMAFEAMNHAGDVHPDMLVVLN 179
           STSISAALG A+     G   +     ++VIGDG+++AGMAFEAMN+AG +   ++V+LN
Sbjct: 123 STSISAALGFAVARDLGGVVPEGLGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLIVILN 182

Query: 180 DNEMSISENVGALNNHLAQVLSGSLYTSIREGGKKVLSGIP-PIKELVRRTEEHLKGMVV 238
           DNEMSI+  VGAL+++L+++ +   +  ++   K   S +P P +E  +R ++ LKGM V
Sbjct: 183 DNEMSIAPPVGALSSYLSRLYAEEPFQELKAVAKGAASLLPEPFREGAKRAKDMLKGMAV 242

Query: 239 PGTLFEELGFNYIGPVDGHDVLELIKTLKNMR-ELKGPQFLHVMTKKGKGYAPAEKDPIG 297
            GTLFE LGF+Y+GP+DGHD+ +L+  L+ ++    GP  +HV+TKKGKGYAPAE     
Sbjct: 243 GGTLFESLGFSYLGPIDGHDMDQLLPVLRTVKARATGPILIHVLTKKGKGYAPAEAARDK 302

Query: 298 YHGVPKFDPSHHSLPKSSNTKPTFSKIFGDFLCDMAAQDPKLMAITPAMREGSGMVRFSK 357
            H   KFD       K+ +  P+++ +FG  L  +AA+D K+ A+T AM +G+G+   ++
Sbjct: 303 GHATAKFDMVTGEQKKAPSNAPSYTSVFGKELVRLAAEDDKICAVTAAMPDGTGLSLMAE 362

Query: 358 EYPSQYFDVAIAEQHAVTLATGMAIAGYHPIVAIYSTFLQRGYDQLIHDVAIMNLPVMFA 417
            YPS+ FDV IAEQH VT A  +A  G  P  A+YSTFLQRGYDQ++HDVAI  LPV FA
Sbjct: 363 RYPSRTFDVGIAEQHGVTFAAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFA 422

Query: 418 IDRAGIVGADGQTHQGAFDLSYMRCIPNMLIMAPADENECRQMLYTGHQH-QGPSAVRYP 476
           IDRAG+VGADG TH G+FD++YM  +P M++MA ADE E   M  T   +  GP A RYP
Sbjct: 423 IDRAGLVGADGATHAGSFDIAYMANLPGMVVMAAADEAELAHMTATAAAYDDGPIAFRYP 482

Query: 477 RGNGMGVELESSFTALEIGKGRLMRESTACEGEKVAILSFGTLLPNALQAAEKLNA---- 532
           RG G GV++  +   LEIGKGR+++     EG++VAILSFGT L    +AAE L+A    
Sbjct: 483 RGEGEGVDMPEAPEVLEIGKGRMIQ-----EGKRVAILSFGTRLGEVRKAAEALSARGIT 537

Query: 533 -TVADMRFVKPLDEALIKQLAQTHDVLVTLEENAIAGGAGAGVIEFLMKEKQLKPVL--- 588
            T+AD RF KPLD  +I +LA  H+ L+T+EE A+ GG G+ V + L +E      L   
Sbjct: 538 PTIADARFAKPLDRDMILKLAADHEALITIEEGAV-GGFGSHVAQLLAEEGIFDSGLKYR 596

Query: 589 NLGLPDQFIVQGTQEEMHAELGLDGAGIERAIRDYL 624
           ++ LPD FI Q +  +M+    ++   IE  + + L
Sbjct: 597 SMVLPDTFIDQASPADMYNVAAMNAPQIEAKVLEVL 632