Pairwise Alignments

Query, 626 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., 1-deoxy-D-xylulose-5-phosphate synthase (RefSeq) from Shewanella loihica PV-4

 Score =  918 bits (2372), Expect = 0.0
 Identities = 455/626 (72%), Positives = 522/626 (83%), Gaps = 6/626 (0%)

Query: 1   MTLDISKYPTLALANTPDELRSLPKEVLPKLCDELRTYLLNSVSQSSGHLASGLGTVELT 60
           M+LDI+KYP LA A+TPDELR LP+ VLPKL DELR+YLL SV  SSGH ASGLGTVELT
Sbjct: 1   MSLDITKYPVLAQADTPDELRQLPQGVLPKLADELRSYLLQSVGISSGHFASGLGTVELT 60

Query: 61  VALHYVYHTPFDHLIWDVGHQAYPHKILTGRRDQMPTIRQKDGLHPFPWREESEYDTLSV 120
           VALHYVY+TPFD LIWDVGHQAYPHKILTGRRD+MPTIRQK G+HPFPWREESEYDT SV
Sbjct: 61  VALHYVYNTPFDRLIWDVGHQAYPHKILTGRRDKMPTIRQKGGIHPFPWREESEYDTFSV 120

Query: 121 GHSSTSISAALGMAICAGKEGKDRKVVSVIGDGAITAGMAFEAMNHAGDVHPDMLVVLND 180
           GHS TSISAAL MA+ A KE   RKVV+VIGDGA+T GM FEAMNHAGD+H DMLVVLND
Sbjct: 121 GHSGTSISAALAMAVAAEKEQAGRKVVAVIGDGAMTGGMVFEAMNHAGDLHNDMLVVLND 180

Query: 181 NEMSISENVGALNNHLAQVLSGSLYTSIREGGKKVLSGIPPIKELVRRTEEHLKGMVVPG 240
           NEMSISENVGALNNHLAQ++SG LYT+IRE  KKVL G+P IKE+ +RTEEHLKGMVVPG
Sbjct: 181 NEMSISENVGALNNHLAQLMSGRLYTTIRENSKKVLKGMPVIKEMAKRTEEHLKGMVVPG 240

Query: 241 TLFEELGFNYIGPVDGHDVLELIKTLKNMRELKGPQFLHVMTKKGKGYAPAEKDPIGYHG 300
           T+FEELGFNYIGP+DGHDV  L++TL+NMR L GPQ LH+MTKKG+GY PAEKDPIG+H 
Sbjct: 241 TMFEELGFNYIGPIDGHDVDALVETLRNMRNLSGPQILHIMTKKGRGYEPAEKDPIGWHA 300

Query: 301 VPKFDPSHHSLPKSSNTKPTFSKIFGDFLCDMAAQDPKLMAITPAMREGSGMVRFSKEYP 360
           VPKFDPS  + P +    PTFS++FG +LCDMA +D K++ ITPAMREGSGMV FS+ +P
Sbjct: 301 VPKFDPSTFAKPAAKPANPTFSQVFGRWLCDMAQKDDKVLGITPAMREGSGMVEFSQRFP 360

Query: 361 SQYFDVAIAEQHAVTLATGMAIAGYHPIVAIYSTFLQRGYDQLIHDVAIMNLPVMFAIDR 420
           +QYFD AIAEQHAVTLA G A  GY P++AIYSTFLQRGYDQLIHDVA+  LPV+FAIDR
Sbjct: 361 NQYFDAAIAEQHAVTLAAGFACEGYKPVLAIYSTFLQRGYDQLIHDVALQKLPVIFAIDR 420

Query: 421 AGIVGADGQTHQGAFDLSYMRCIPNMLIMAPADENECRQMLYTGH-QHQGPSAVRYPRGN 479
            GIVG DG THQGAFDLSYMR IPNM+IMAP+DENECRQMLYTG+  ++GP+A+RYPRG+
Sbjct: 421 GGIVGPDGPTHQGAFDLSYMRAIPNMVIMAPSDENECRQMLYTGYCYNEGPTAIRYPRGS 480

Query: 480 GMGVELESSFTALEIGKGRLMRESTACEGEKVAILSFGTLLPNALQAAEKLNATVADMRF 539
             G     + TA EIGKG + R     EG+K+AIL+FGT L +A QAAE L+AT+ADMRF
Sbjct: 481 ATGEPQVETMTAYEIGKGLIKR-----EGKKIAILNFGTTLASASQAAEALDATLADMRF 535

Query: 540 VKPLDEALIKQLAQTHDVLVTLEENAIAGGAGAGVIEFLMKEKQLKPVLNLGLPDQFIVQ 599
           VKPLD  L+KQLA +HD+LVT+EENAI GGAG+GV+E L + K   PVLN+GLPD+FI  
Sbjct: 536 VKPLDVELVKQLATSHDLLVTVEENAIMGGAGSGVLELLQQLKLPMPVLNIGLPDEFIKH 595

Query: 600 GTQEEMHAELGLDGAGIERAIRDYLA 625
           G   E+ AEL LDG GIE  IR YLA
Sbjct: 596 GECGEILAELQLDGPGIEAQIRAYLA 621