Pairwise Alignments

Query, 626 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., 1-deoxy-D-xylulose-5-phosphate synthase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  544 bits (1401), Expect = e-159
 Identities = 296/630 (46%), Positives = 398/630 (63%), Gaps = 19/630 (3%)

Query: 9   PTLALANTPDELRSLPKEVLPKLCDELRTYLLNSVSQSSGHLASGLGTVELTVALHYVYH 68
           P L    +P ++  L  E + +L DELR  ++ +VS++ GHLA  LG VELT+AL   + 
Sbjct: 19  PLLDSLASPRDVAGLAPEQVQQLADELRQRIIATVSRNGGHLAPSLGVVELTIALLTSFD 78

Query: 69  TPFDHLIWDVGHQAYPHKILTGRRDQMPTIRQKDGLHPFPWREESEYDTLSVGHSSTSIS 128
              D +IWDVGHQAY  K+LTGR     T+R+  G+  FP   ES YD   VGHSSTSIS
Sbjct: 79  AGRDKVIWDVGHQAYAWKLLTGRAANFHTLRRGGGISGFPKMAESPYDHFGVGHSSTSIS 138

Query: 129 AALGMAICAGKEGKDRKVVSVIGDGAITAGMAFEAMNHAGDVHPDMLVVLNDNEMSISEN 188
           AALGMA+     G D  VV+VIGDG++TAG+AFE +N AG +   ++VVLNDNEMSIS+N
Sbjct: 139 AALGMAMARDLAGGDNNVVAVIGDGSMTAGLAFEGLNQAGAMDRKLIVVLNDNEMSISKN 198

Query: 189 VGALNNHLAQVLSGSLYTSIREGGKKVLSGIPPIKE----LVRRTEEHLKGMVVPGTLFE 244
           VGAL+  L++ LS      +++  +  +  IP I E      +R+E  LKG   PG LFE
Sbjct: 199 VGALSLFLSRNLSKRWVRRMKKDMETFMRSIPGIGEDMLGYAKRSEHSLKGFFTPGMLFE 258

Query: 245 ELGFNYIGPVDGHDVLELIKTLKNMRELKGPQFLHVMTKKGKGYAPAEKDPIGYHGVPKF 304
             GFNYIGPV+GHDV  L +T    R L  P  LHV+T+KGKGYAPAE +P  +HGV +F
Sbjct: 259 AFGFNYIGPVNGHDVKALTRTFDMARTLDEPVLLHVLTRKGKGYAPAETNPTHFHGVGRF 318

Query: 305 DPSHHSLPKSSNTK--PTFSKIFGDFLCDMAAQDPKLMAITPAMREGSGMVRFSKEYPSQ 362
           +P      K ++    P+F+ +FG+ LC +A +D +++AIT AM EG+G   F   +P +
Sbjct: 319 EPETGKAAKLADAPALPSFTDVFGETLCMLAEEDKRVIAITAAMPEGTGTSCFCARHPER 378

Query: 363 YFDVAIAEQHAVTLATGMAIAGYHPIVAIYSTFLQRGYDQLIHDVAIMNLPVMFAIDRAG 422
           + DV I EQHAVT A G+A  G  P VAIYSTFLQR YDQ++HDV I NLPV+F +DRAG
Sbjct: 379 FVDVGICEQHAVTFAAGLATQGLRPFVAIYSTFLQRSYDQVVHDVCIQNLPVVFCVDRAG 438

Query: 423 IVGADGQTHQGAFDLSYMRCIPNMLIMAPADENECRQMLYTGHQHQGPSAVRYPRGNGMG 482
           +VG DG TH G FD+SY+R IPNM I+AP DE + R  + T      P AVRYPRG G G
Sbjct: 439 LVGEDGPTHHGVFDISYLRHIPNMHILAPRDEAQLRHAMSTALALDAPVAVRYPRGVGTG 498

Query: 483 VELESSFTALEIGKGRLMRESTACEGEKVAILSFGTLLPNALQAAEKL------NATVAD 536
             L      L +G+G +++     +GE +A+++ G+ +P AL+AAE++        TV D
Sbjct: 499 AALPPRGEVLPLGRGEVLK-----QGEGLAVIACGSRVPPALEAAERVAEDSGRQVTVFD 553

Query: 537 MRFVKPLDEALIKQLAQTHDVLVTLEENAIAGGAGAGVIEFLMKEKQLK--PVLNLGLPD 594
             + KPL    + +LA THD L+ +EENA+AGG  + V+E L     L+   +  LG+PD
Sbjct: 554 AVWAKPLPVDQLLELAATHDALLLIEENALAGGFTSAVLECLSDHGALRGQTIRRLGVPD 613

Query: 595 QFIVQGTQEEMHAELGLDGAGIERAIRDYL 624
            F+  G+Q+E+ A LGL   GIE  +R  L
Sbjct: 614 HFVEHGSQKELRARLGLCVDGIEETLRSML 643