Pairwise Alignments

Query, 626 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 641 a.a., deoxyxylulose-5-phosphate synthase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  553 bits (1424), Expect = e-161
 Identities = 294/629 (46%), Positives = 405/629 (64%), Gaps = 19/629 (3%)

Query: 11  LALANTPDELRSLPKEVLPKLCDELRTYLLNSVSQSSGHLASGLGTVELTVALHYVYHTP 70
           LA    P ++  L  + L  L  +LRT ++++VS++ GHLA  LG VELT+A+   +   
Sbjct: 10  LARIQRPTDVAGLSADDLRTLAADLRTAIIDTVSKNGGHLAPSLGVVELTLAMLSTFDPG 69

Query: 71  FDHLIWDVGHQAYPHKILTGRRDQMPTIRQKDGLHPFPWREESEYDTLSVGHSSTSISAA 130
            D ++WDVGHQAY  K+LTGR     T+R++ G+  FP   ESEYD   VGHSSTSISAA
Sbjct: 70  KDKVVWDVGHQAYAWKLLTGRAADFHTLRRRHGISGFPKPCESEYDHFGVGHSSTSISAA 129

Query: 131 LGMAICAGKEGKDRKVVSVIGDGAITAGMAFEAMNHAGDVHPDMLVVLNDNEMSISENVG 190
           LGMA+     G D  VV+VIGDG++TAG+AFE +N AGD+   ++V+LNDNEMSIS NVG
Sbjct: 130 LGMALARDLAGDDHHVVAVIGDGSLTAGLAFEGLNQAGDMGRRLIVILNDNEMSISRNVG 189

Query: 191 ALNNHLAQVLSGSLYTSIREGGKKVLSGIPPIKE----LVRRTEEHLKGMVVPGTLFEEL 246
           AL+  L++ LS      ++   +  L  IP I +      +R+E  LK    PG LFE  
Sbjct: 190 ALSLFLSRNLSKGWARRVKRDVETALKSIPGIGDEMVAYAKRSEHSLKSFFTPGMLFEAF 249

Query: 247 GFNYIGPVDGHDVLELIKTLKNMRELKGPQFLHVMTKKGKGYAPAEKDPIGYHGVPKFDP 306
            FNYIGPVDGHDV  L++ L+  +    P  LHV+T+KGKGY PAE +P  +HGV +F+P
Sbjct: 250 QFNYIGPVDGHDVKALVRNLELAKTNDRPVLLHVLTRKGKGYTPAEANPAFFHGVGRFEP 309

Query: 307 SHHSLPKSSNTK--PTFSKIFGDFLCDMAAQDPKLMAITPAMREGSGMVRFSKEYPSQYF 364
                 K  +T   PT++ +FG+ LC +A  D +++AIT AM EG+G   F + +P ++ 
Sbjct: 310 ETGRARKPGDTPVLPTYTDVFGETLCRLADMDERIVAITAAMPEGTGTNCFRERHPDRFV 369

Query: 365 DVAIAEQHAVTLATGMAIAGYHPIVAIYSTFLQRGYDQLIHDVAIMNLPVMFAIDRAGIV 424
           DV I EQHAVT A G+AI GY P VAIYSTFLQR YDQ++HDV I  LPV+  +DRAG+V
Sbjct: 370 DVGICEQHAVTFAAGLAIQGYRPFVAIYSTFLQRSYDQIVHDVCIQKLPVVLCLDRAGLV 429

Query: 425 GADGQTHQGAFDLSYMRCIPNMLIMAPADENECRQMLYTGHQHQGPSAVRYPRGNGMGVE 484
           G DG TH GAFDLS++R IP+M I+AP DE + +  +YT      P A+RYPRG G G+ 
Sbjct: 430 GEDGPTHHGAFDLSFLRHIPHMSIIAPRDEADLQAAMYTALHLDAPLAIRYPRGVGFGIP 489

Query: 485 LESSFTALEIGKGRLMRESTACEGEKVAILSFGTLLPNALQAAEKL------NATVADMR 538
           L  S + L +G G +++     EGE VA+++ G+ +  +L+AAE+L      +ATV D R
Sbjct: 490 LAESPSPLPVGVGEVLK-----EGEGVAVIAVGSRVHPSLEAAERLAEETGRHATVFDAR 544

Query: 539 FVKPLDEALIKQLAQTHDVLVTLEENAIAGGAGAGVIEFLMKEKQL--KPVLNLGLPDQF 596
           +VKPL EA +  +   HD L+ +EENA+AGG  + V+E L     L  K +  +GLPD+F
Sbjct: 545 WVKPLPEAQLLDIVARHDALLFVEENALAGGFSSAVLELLADRNALSGKHIRRIGLPDEF 604

Query: 597 IVQGTQEEMHAELGLDGAGIERAIRDYLA 625
           + QGTQ+E+   LGL   G+ +A+++  A
Sbjct: 605 VEQGTQKELRVSLGLCMDGVGKALKELFA 633