Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., 23S rRNA pseudouridylate synthase from Pseudomonas fluorescens FW300-N2C3

 Score = 99.4 bits (246), Expect = 8e-26
 Identities = 72/226 (31%), Positives = 116/226 (51%), Gaps = 16/226 (7%)

Query: 4   IVYQDEYLVAVNKPAGMLVHR-SWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGVLV 62
           IVY+D+ L+ +NKPAG+ VH  S L+    E   Q   D   + +  +HRLDR TSG+L+
Sbjct: 97  IVYEDKALIVINKPAGIAVHGGSGLNFGVIEAFRQLRPD--AKELELVHRLDRDTSGLLM 154

Query: 63  FALSSQIASEVMPMFANHEMEKTYHAIVRG-WIEEANVLDYPLKEELDKIADKFAKQDKE 121
            A    +   +        ++K Y A+VRG W      +  PL +   +  ++  + ++E
Sbjct: 155 IAKKRSMLRHLHEQLRGDGVDKRYMALVRGRWETSIKQVRAPLLKSNLRSGERMVEVNEE 214

Query: 122 AQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGDTTH 181
            + A+T ++ L + +       FAT    L+E +P TGR HQ+R H  H  H I GD+ +
Sbjct: 215 GKEALTVFKVLRRFD------DFAT----LVEAKPVTGRTHQIRVHTLHAGHCIAGDSKY 264

Query: 182 GDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLDEVW 227
           GD    +  R+    +RL LHA  L    P   + L ++A +D++W
Sbjct: 265 GDDDFTKEIRD-LGGKRLFLHAYMLTVPLPDGGE-LKLQAPVDDMW 308