Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., 23S rRNA pseudouridylate synthase from Pseudomonas fluorescens FW300-N2E3

 Score = 97.8 bits (242), Expect = 2e-25
 Identities = 74/227 (32%), Positives = 116/227 (51%), Gaps = 17/227 (7%)

Query: 4   IVYQDEYLVAVNKPAGMLVHR-SWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGVLV 62
           IV++D+ L+ +NKP G+ VH  S L+    E   Q   D   + +  +HRLDR TSG+L+
Sbjct: 97  IVFEDKALIVINKPCGIAVHGGSGLNYGVIEAFRQLRPDC--KELELVHRLDRDTSGLLM 154

Query: 63  FALSSQIASEVMPMFANHEMEKTYHAIVRG-WIEEANVLDYPLKEELDKIADKFAKQDKE 121
            A    +   +        ++K Y A+VRG W      +  PL +   +  ++  + D+E
Sbjct: 155 IAKKRSMLRHLHTALRGDGVDKRYMALVRGNWAASIKQVRAPLGKSNLRSGERMVEVDEE 214

Query: 122 -AQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGDTT 180
             + +VT ++ L +       G FAT    L+E +P TGR HQ+R H  H  H I GDT 
Sbjct: 215 EGKESVTVFKVLRRF------GDFAT----LIEAKPITGRTHQIRVHTLHAGHCIAGDTK 264

Query: 181 HGDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLDEVW 227
           +GD   ++  R+    +RL LHA  L    P   + L ++A +DE+W
Sbjct: 265 YGDDDFSKEIRD-LGGKRLFLHAYMLTVSLPDGGE-LKLQAPVDEMW 309