Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., tRNA pseudouridine synthase C (EC 4.2.1.70) from Xanthomonas campestris pv. campestris strain 8004

 Score =  173 bits (438), Expect = 3e-48
 Identities = 102/236 (43%), Positives = 140/236 (59%), Gaps = 11/236 (4%)

Query: 2   LEIVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGVL 61
           L+I+YQD  L  V+KPAG++VH S L + E +F+   LR Q+G+ +F +HRLDR TSG L
Sbjct: 1   LQILYQDAVLAVVDKPAGLMVHDSKLARGEDDFLADRLRVQLGRPIFLVHRLDRATSGCL 60

Query: 62  VFALSSQIASEVMPMFANHEMEKTYHAIVRGW-IEEANVLDYPLKEELDKIADKFAKQDK 120
           + A     AS +       E+EK Y AI RGW  EE  ++D+    +LD    K  K   
Sbjct: 61  LLAFDRDTASALGKALMAGEVEKDYLAICRGWPAEERFIVDH----DLDGGPGKPIK--- 113

Query: 121 EAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGDTT 180
             + AVT ++ LA  EL I +  FAT+RY L+  QP+TGR  Q+RRH+ HL H ++GDT+
Sbjct: 114 --KPAVTHFQRLATGELEIPSTGFATSRYALLRCQPQTGRFRQIRRHLKHLSHHMIGDTS 171

Query: 181 HGDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLDEVWQGLLSEFGW 236
           HGDG HNR FR      R++LHA  L F HP   + + + A LD  +    + FGW
Sbjct: 172 HGDGRHNRSFR-MLGIHRMLLHAERLGFPHPADGRRISVVAPLDVEFAKACALFGW 226