Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) from Xanthomonas campestris pv. campestris strain 8004

 Score =  103 bits (256), Expect = 6e-27
 Identities = 74/241 (30%), Positives = 121/241 (50%), Gaps = 24/241 (9%)

Query: 2   LEIVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQ---IGQHVFPLHRLDRPTS 58
           L ++Y+D++++ ++KPAG++VH    +   T       RD           +HRLD+ TS
Sbjct: 90  LNVLYEDDHVLVIDKPAGLVVHPGAGNPDGTLVNALLFRDPNLAAVPRAGVVHRLDKDTS 149

Query: 59  GVLVFALSSQIASEVMPMFANHEMEKTYHAIVRGWIEEANVLDYPL-KEELDKIADKFAK 117
           GV+V A + Q  + ++   +  ++ + Y A+V G +      D P+ +   D++  K A 
Sbjct: 150 GVMVVARTLQAQTALVEQLSARDVHRQYLAVVVGALVSGGTADAPIDRHPRDRL--KMAV 207

Query: 118 QDKEAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVG 177
           +D + + AVT YR   +     A           +E + +TGR HQ+R HMAHL+ PIVG
Sbjct: 208 RD-DGRDAVTHYRLRERFRAHTA-----------LECRLETGRTHQIRVHMAHLKSPIVG 255

Query: 178 DTTHG------DGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLDEVWQGLL 231
           D  +G       G  + L  E    +R  LHA  L F+HP + +P+   A + E  Q L+
Sbjct: 256 DPLYGGALKLPKGATDTLVAELRGFKRQALHAETLEFLHPVSGEPIRASAPVPEDLQRLM 315

Query: 232 S 232
           S
Sbjct: 316 S 316