Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., ribosomal large subunit pseudouridine synthase C from Pseudomonas syringae pv. syringae B728a

 Score =  103 bits (256), Expect = 5e-27
 Identities = 74/226 (32%), Positives = 115/226 (50%), Gaps = 16/226 (7%)

Query: 4   IVYQDEYLVAVNKPAGMLVHR-SWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGVLV 62
           IVY+D+ L+ +NKPAG+ VH  S L     E   Q   D   + +  +HRLDR TSG+L+
Sbjct: 97  IVYEDKALIVLNKPAGIAVHGGSGLSFGVIEAFRQLRPD--AKELELVHRLDRDTSGLLM 154

Query: 63  FALSSQIASEVMPMFANHEMEKTYHAIVRG-WIEEANVLDYPLKEELDKIADKFAKQDKE 121
            A    +   +        ++K Y A+VRG W      +  PL +   +  ++  + ++E
Sbjct: 155 IAKKRSMLRHLHEALRGDGVDKRYMALVRGNWATALKQVRAPLMKSNLRSGERMVEVNEE 214

Query: 122 AQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGDTTH 181
            + A+T ++ L +       G FAT    ++E +P TGR HQ+R H  H  H I GDT +
Sbjct: 215 GKEALTIFKVLRRF------GDFAT----MVEAKPVTGRTHQIRVHTLHAGHAIAGDTKY 264

Query: 182 GDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLDEVW 227
           GD   +R  R+    +RL LHA  L    P     L ++A +D++W
Sbjct: 265 GDENFSREIRD-LGGKRLFLHAYMLTVPMP-DGSKLNVQAPVDDMW 308