Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., ribosomal large subunit pseudouridine synthase from Sinorhizobium meliloti 1021

 Score = 90.5 bits (223), Expect = 4e-23
 Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 36/242 (14%)

Query: 2   LEIVYQDEYLVAVNKPAGMLVHR---SWLDKHETEFVMQTLRDQIGQHVFPL-------- 50
           L+++Y+D  L+ + KPAG++VH    +W     T  ++  L    G  +  +        
Sbjct: 90  LDVLYEDADLIVLVKPAGLVVHPGAGNW-----TGTLVNALIHHCGDSLSGIGGVKRPGI 144

Query: 51  -HRLDRPTSGVLVFALSSQIASEVMPMFANH----EMEKTYHAIVRGWIEEAN-VLDYPL 104
            HRLD+ TSGV+V A +      +   FA+H     +E+ Y A+V G   +    +D PL
Sbjct: 145 VHRLDKDTSGVMVVAKNDAAHRHLSDQFADHGRNGPLERAYRAVVWGRPRQLKGKIDAPL 204

Query: 105 KEELDKIADKFAKQDKE-AQSAVTAYRPLAKV-ELPIATGKFATTRYCLMEMQPKTGRKH 162
               D+      ++D + A+ A+T Y  + +  E P  T   A+T  C +E    TGR H
Sbjct: 205 GRAGDRTKRAVKREDSDDAREAITHYEVVERYHEKPDGTS-LASTVECHLE----TGRTH 259

Query: 163 QLRRHMAHLRHPIVGDTTHGDGVHNR--LFREHFSA-----QRLMLHASELRFMHPYTQQ 215
           Q+R HMAH+ HP++GD  +G     +  L  E   A      R  LHA  L+F HP T +
Sbjct: 260 QIRVHMAHIGHPLIGDPDYGAAFRTKANLLPEPARAAVNRFPRQALHAFMLQFEHPATGE 319

Query: 216 PL 217
            +
Sbjct: 320 TM 321