Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., RluA family pseudouridine synthase from Parabacteroides merdae CL09T00C40

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 70/223 (31%), Positives = 108/223 (48%), Gaps = 29/223 (13%)

Query: 1   MLEIVYQDEYLVAVNKPAGMLVHRSWLDKHET------EFVMQTLRDQIGQHVFPLHRLD 54
           +L IV++D+ L+ VNK  G+L   S   K  T      E+V +T        +F LHRLD
Sbjct: 89  LLTIVWEDDDLIVVNKKEGLLSVSSTRVKERTALHLLSEYVKKT---DPRNKIFVLHRLD 145

Query: 55  RPTSGVLVFALSSQIASEVMPMFANHEMEKTYHAIVRGWIEEANVLDYPLKEELDKIADK 114
           R TSG+++FA + Q+   +   + +    +TY A+V G  E+ + L      E  K+   
Sbjct: 146 RDTSGLMMFAKNLQVQKALQSNWNSAITARTYVAVVEGRPEKDSDLIVSNLTENAKM-QV 204

Query: 115 FAKQDKEAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHP 174
           +   + + + A+T YR L            +   Y L+E+  +TGRK+Q+R  M  + H 
Sbjct: 205 YVTAEGDGKEAITRYRLL-----------HSNGAYSLLELDLETGRKNQIRAQMQSIGHS 253

Query: 175 IVGDTTHGDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPL 217
           I GD  +G         E     RLMLHA  L F+HP T + +
Sbjct: 254 IAGDYKYG--------AETDPTGRLMLHARRLNFIHPVTGEEM 288