Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., ribosomal large subunit pseudouridine synthase C from Phaeobacter inhibens DSM 17395

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 75/250 (30%), Positives = 112/250 (44%), Gaps = 18/250 (7%)

Query: 4   IVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGVLVF 63
           ++Y+D+ ++ +NKPAG+ V          + +   L+    +    +HRLD+ TSGVLV 
Sbjct: 89  VIYKDDAVIVLNKPAGLAVQGGSGTTKHVDGLSAALQFDAEEKPRLVHRLDKDTSGVLVL 148

Query: 64  ALSSQIASEVMPMFANHEMEKTYHAIVRG----WIEE--ANVLDYPLKEELDKIADKFAK 117
           A +   A  +   F +    K Y A+V G    ++ E    ++  P   +  +     A 
Sbjct: 149 ARTRLAAQSLTAAFRHRATRKIYWALVAGVPTPYLGEIKCGLVKAPGHGKSGEGEKMIAI 208

Query: 118 QDKEAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVG 177
              E  S   A R         AT     +R   + M+P TGR HQLR HMA + HPI G
Sbjct: 209 HSNEVDSTPGAKRS----HTHYATLYRVASRAAWVAMEPITGRTHQLRAHMAEIGHPIAG 264

Query: 178 DTTHGDGVHNRLFREHFSAQ-------RLMLHASELRFMHPYTQQPLVIRAGLDEVWQGL 230
           D  +G      L  + + AQ       +L LH   + F HP T++PL I A L +  +  
Sbjct: 265 DGKYGGSSQENL-GDGWGAQLGGIISKKLHLHCRRMAFEHPTTKKPLSITAPLPDHMKDS 323

Query: 231 LSEFGWQESL 240
              FGW E L
Sbjct: 324 WDTFGWSEDL 333