Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., pseudouridine synthase from Pedobacter sp. GW460-11-11-14-LB5

 Score = 87.4 bits (215), Expect = 3e-22
 Identities = 67/240 (27%), Positives = 114/240 (47%), Gaps = 29/240 (12%)

Query: 2   LEIVYQDEYLVAVNKPAGMLVHRSWLDKHET-----EFVMQTLRDQIGQHVFP--LHRLD 54
           L+I+Y+D  L+ VNK AGM+VH  + +   T      F  + L    G    P  +HR+D
Sbjct: 96  LDIIYEDSDLLVVNKAAGMVVHPGFNNYTGTLVNALAFHFEQLPQLPGNDGRPGLVHRID 155

Query: 55  RPTSGVLVFALSSQIASEVMPMFANHEMEKTYHAIVRGWIE-EANVLDYPLKEELDKIAD 113
           + TSG+L+ + + +  + +   F +H + + Y A+V G IE +  V  Y  +   D+   
Sbjct: 156 KDTSGLLLISKNEKSITHLARQFFDHSITRKYIALVWGDIENDGTVTGYIGRSAKDRRVM 215

Query: 114 KFAKQDKEAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRH 173
                +++ + +VT Y+ L ++        + T   C +E    TGR HQ+R HM H+ H
Sbjct: 216 DIYDDEEKGKWSVTHYKVLKRLG-------YVTLISCELE----TGRTHQIRAHMQHIGH 264

Query: 174 PIVGDTTHG-----DGVHNRLFREHFS-----AQRLMLHASELRFMHPYTQQPLVIRAGL 223
           P+  D  +G      G     +++          R  LHA  L F+HP T++ +   + L
Sbjct: 265 PLFNDAMYGGDKILKGTTFNKYKQFVDNCFELLPRQALHAQSLGFIHPSTKEYMYFESPL 324