Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., pseudouridylate synthase (RefSeq) from Shewanella loihica PV-4

 Score =  266 bits (681), Expect = 2e-76
 Identities = 125/240 (52%), Positives = 170/240 (70%)

Query: 2   LEIVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGVL 61
           +EI+Y+D+ LVA++KPAG+LVHRS+L + E  F MQ  RD +G HVFP+HRLDRPTSGVL
Sbjct: 23  IEILYEDDDLVAIHKPAGLLVHRSYLARREKYFAMQMTRDLVGCHVFPVHRLDRPTSGVL 82

Query: 62  VFALSSQIASEVMPMFANHEMEKTYHAIVRGWIEEANVLDYPLKEELDKIADKFAKQDKE 121
           +FA SS++A+++   FA+  ++K Y A+VRG + E  +LDYPLK+ELD++ DK    +K 
Sbjct: 83  LFAKSSEMANQLCEQFASKSVQKHYVALVRGNMHEPGLLDYPLKQELDELGDKNVDPNKA 142

Query: 122 AQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGDTTH 181
           AQ A T+Y PL   E+P  +G++A++RY L+++ P TGRKHQLRRHMAHLRHPI+GDTTH
Sbjct: 143 AQEAQTSYHPLLNCEIPYPSGRYASSRYALVQLTPHTGRKHQLRRHMAHLRHPIIGDTTH 202

Query: 182 GDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLDEVWQGLLSEFGWQESLL 241
           GDG  NR  REH    RL L A +L F HP + + + +   L+  W  L    GW +  L
Sbjct: 203 GDGKQNRFMREHSGINRLWLIAKKLEFNHPRSGERIAVETELEAEWLSLFELLGWDDQQL 262