Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., RNA pseudouridine synthase from Klebsiella michiganensis M5al

 Score = 90.9 bits (224), Expect = 2e-23
 Identities = 72/217 (33%), Positives = 112/217 (51%), Gaps = 26/217 (11%)

Query: 2   LEIVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFP----LHRLDRPT 57
           ++I+YQDE+L+ ++KPAG+L   S  +    + V   L  Q     FP     HRLD  T
Sbjct: 17  IDILYQDEHLLLIDKPAGLL-SLSGKNPRNLDSVHYRLVQQ-----FPGCALAHRLDFGT 70

Query: 58  SGVLVFALSSQIASEVMPMFANHEMEKTYHAIVRGWI-EEANVLDYPLKEE--LDKIADK 114
           SG++V A +  I + +   F+   + K Y A++ G + ++   +D P+ ++  L  +   
Sbjct: 71  SGLMVIARNKVINAALCQQFSQRAVSKVYSALLCGHLADDEGTIDAPIAKDPALFPLMTI 130

Query: 115 FAKQDKEAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHP 174
             ++ K A+S    YR + ++    +      TR   +++ P+TGR HQLR H   L HP
Sbjct: 131 CPRRGKPARSG---YRVVERLRYQDSV---PVTR---VQLTPETGRTHQLRIHCQQLGHP 181

Query: 175 IVGDTTHGDGVHNRLFREHFSAQRLMLHASELRFMHP 211
           I+G   +G      L      A RLMLHASEL FMHP
Sbjct: 182 ILGCDLYG----GLLLPGTEQAPRLMLHASELHFMHP 214