Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA from Klebsiella michiganensis M5al

 Score = 97.8 bits (242), Expect = 2e-25
 Identities = 83/238 (34%), Positives = 111/238 (46%), Gaps = 48/238 (20%)

Query: 2   LEIVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFP----LHRLDRPT 57
           L I+YQDE+++ VNKP+G+L     L +H+   + +  RD      FP    +HRLD  T
Sbjct: 14  LVILYQDEHIMVVNKPSGLLSVPGRLAEHKDSVMTRIQRD------FPQAESVHRLDMAT 67

Query: 58  SGVLVFALSSQIASEVMPMFANHEMEKTYHAIVRGWIEEAN-VLDYPLKEELDKIADKFA 116
           SGV+V AL+     E+   F   E +K Y A V G  E+A  ++D PL      I D   
Sbjct: 68  SGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPEKAEGLVDLPL------ICD--- 118

Query: 117 KQDKEAQSAVTAYRPLAKVELPIATGKFATTRYCLME----------MQPKTGRKHQLRR 166
                        RP  KV     TGK A T Y ++E          ++P TGR HQLR 
Sbjct: 119 ----------WPNRPKQKV--CYETGKAAQTEYEVLEFAADNTARVRLKPITGRSHQLRV 166

Query: 167 HMAHLRHPIVGDTTHGDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLD 224
           HM  L HPI+GD  +       +      A RL+LHA  L   HP     +  RA +D
Sbjct: 167 HMLALGHPILGDRFYASPEALAM------APRLLLHAETLTITHPAFGNSMTFRAPID 218