Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., Dual-specificity RNA pseudouridine synthase RluA from Enterobacter sp. TBS_079

 Score = 89.0 bits (219), Expect = 7e-23
 Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 19/222 (8%)

Query: 2   LEIVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGVL 61
           +EI++QDE+LV +NKP+G+L       ++      + ++   G  +  +HRLD  TSG++
Sbjct: 17  IEILWQDEHLVLINKPSGLLSLSGKNPRNRDSVHYRLVQTFPGCTL--VHRLDFGTSGLM 74

Query: 62  VFALSSQIASEVMPMFANHEMEKTYHAIVRGWIE-EANVLDYPLKEE--LDKIADKFAKQ 118
           V A +  I + +   F+   + K Y A++ G +E +  V+D P+ ++  L  +    A  
Sbjct: 75  VIARNKAINAALCHQFSQRAVRKVYSALLCGHVENDEGVIDAPIAKDPALFPLMSICAIT 134

Query: 119 DKEAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGD 178
            K A+S           ELP+            + + P+TGR HQLR H   L +PI+G 
Sbjct: 135 GKPARSRYQVVDRFYDAELPLTR----------VRLTPETGRTHQLRIHCQQLGYPILGC 184

Query: 179 TTHGDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIR 220
             +G               RLMLHASEL F+HP + + +  R
Sbjct: 185 DLYG----GLALPGTEPIPRLMLHASELDFVHPVSAEAINAR 222