Pairwise Alignments

Query, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., 23S rRNA pseudouridine955/2504/2580 synthase from Paraburkholderia bryophila 376MFSha3.1

 Score = 96.3 bits (238), Expect = 7e-25
 Identities = 69/228 (30%), Positives = 111/228 (48%), Gaps = 23/228 (10%)

Query: 5   VYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFP--LHRLDRPTSGVLV 62
           +++DE+L+ ++KPAG+ VH           V++ +R+   Q  F   +HRLDR TSG+L+
Sbjct: 106 IFEDEHLLVIDKPAGVAVHGG---SGVAFGVIEQMREARPQAKFLELVHRLDRETSGILM 162

Query: 63  FALSSQIASEVMPMFANHEMEKTYHAIVRG-WIEE---ANVLDYPLKEELDKIADKFAKQ 118
            A        +      + M+K Y+A V G W  +      +  PL + L    ++  + 
Sbjct: 163 LAKKRSALVNLHDQIRENRMDKRYYACVHGEWASDWGRRRAVKEPLHKYLTADGERRVRV 222

Query: 119 DKEAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGD 178
             +  ++ T +  + +              Y L+E + KTGR HQ+R H+ HL  PIVGD
Sbjct: 223 QADGLASHTVFNLIDR-----------WPDYALLEAELKTGRTHQIRVHLQHLELPIVGD 271

Query: 179 TTHGDGVHNR-LFREHF--SAQRLMLHASELRFMHPYTQQPLVIRAGL 223
             +GD   N+ L R +     +R+ LHA  L+  HP T  PL + A L
Sbjct: 272 AKYGDFALNKALARANAKPGLKRMFLHAYRLKLTHPATGAPLQLEAPL 319