Pairwise Alignments

Query, 345 a.a., DUF3549 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  223 bits (567), Expect = 7e-63
 Identities = 136/344 (39%), Positives = 201/344 (58%), Gaps = 10/344 (2%)

Query: 1   MDTIRTLTALLQNSGCQYQIFDLGRRVQAMDNRQFAQVELGQQAYPFPLQRHAQFAIVYW 60
           M  I TL+  L  +  Q+Q+++LGRRVQ +D   F Q+E     YP+P+Q HAQFAIV+W
Sbjct: 1   MTEITTLSQFLTTAKTQFQVYELGRRVQHIDMLAFHQIESLVTPYPYPIQGHAQFAIVFW 60

Query: 61  NEQRQPWIWMLKFALDERGLLQQADVGQFIQYLLEAMGSRLHQSLTEEQQQKLANNPYTF 120
           NE +Q +IW LK  LDE+GLL  A   QFI+ +L A+G    Q LT+EQQ +LANNP++F
Sbjct: 61  NESQQHFIWFLKLPLDEQGLLSPAPRSQFIEMVLTALGQDPTQPLTDEQQDRLANNPFSF 120

Query: 121 KPSEDKLAMLHSHIRMQLGLACSQYYEHAQHYFSGGLGWDKWHTVGLQGITDLCARLEQE 180
           KPS++KLA+ ++ +R QLGL+ S  YE A  Y SG +   +W  +GLQG++D+C RL + 
Sbjct: 121 KPSQEKLAVFNALVRKQLGLSASIQYEFAVQYLSGQIAPSEWQHIGLQGLSDVCVRLGEL 180

Query: 181 QNGVLLRKALTHLPAQPLYAVLGALEHVTLPEKLAKRLSELAEAEVKASDPDLFLLAALV 240
            +   +  +  +   +   A+   LEH+ L E LA +L +    +   + P+    A  +
Sbjct: 181 DHEQHILASFDNSAIEVQIALCQCLEHLHLTEALANKLYD----KFVTASPE--YQAYYL 234

Query: 241 RALAGAPANILDATCDAILASPAICHPEVLIALAGRSWMSLENSGRAQRFLIRLAQTQNQ 300
           RALA      L     A L          LI++AGR+W  L+       +L  LA+ Q Q
Sbjct: 235 RALASHTE--LSQQALAHLQQTERLEANELISIAGRNWTVLKQELSRSIYLEALAR-QPQ 291

Query: 301 PLFNQLFADVVMLPALRGVML-PLLHASPSPELAQALEQLQQMT 343
             FNQ+FAD+V +P+LR  +L  L + + S +L+QA+  L + T
Sbjct: 292 AFFNQIFADIVAIPSLRNHLLGELRNPNRSVQLSQAIGGLFKAT 335